# -*- coding: utf-8 -*- from __future__ import division, unicode_literals, print_function, absolute_import import copy import operator as op from pint import DimensionalityError from pint.compat import np, unittest from pint.testsuite import QuantityTestCase, helpers from pint.testsuite.test_umath import TestUFuncs @helpers.requires_numpy() class TestNumpyMethods(QuantityTestCase): FORCE_NDARRAY = True @property def q(self): return [[1,2],[3,4]] * self.ureg.m def test_tolist(self): self.assertEqual(self.q.tolist(), [[1*self.ureg.m, 2*self.ureg.m], [3*self.ureg.m, 4*self.ureg.m]]) def test_sum(self): self.assertEqual(self.q.sum(), 10*self.ureg.m) self.assertQuantityEqual(self.q.sum(0), [4, 6]*self.ureg.m) self.assertQuantityEqual(self.q.sum(1), [3, 7]*self.ureg.m) def test_fill(self): tmp = self.q tmp.fill(6 * self.ureg.ft) self.assertQuantityEqual(tmp, [[6, 6], [6, 6]] * self.ureg.ft) tmp.fill(5 * self.ureg.m) self.assertQuantityEqual(tmp, [[5, 5], [5, 5]] * self.ureg.m) def test_reshape(self): self.assertQuantityEqual(self.q.reshape([1,4]), [[1, 2, 3, 4]] * self.ureg.m) def test_transpose(self): self.assertQuantityEqual(self.q.transpose(), [[1, 3], [2, 4]] * self.ureg.m) def test_flatten(self): self.assertQuantityEqual(self.q.flatten(), [1, 2, 3, 4] * self.ureg.m) def test_ravel(self): self.assertQuantityEqual(self.q.ravel(), [1, 2, 3, 4] * self.ureg.m) def test_squeeze(self): self.assertQuantityEqual( self.q.reshape([1,4]).squeeze(), [1, 2, 3, 4] * self.ureg.m ) def test_take(self): self.assertQuantityEqual(self.q.take([0,1,2,3]), self.q.flatten()) def test_put(self): q = [1., 2., 3., 4.] * self.ureg.m q.put([0, 2], [10.,20.]*self.ureg.m) self.assertQuantityEqual(q, [10., 2., 20., 4.]*self.ureg.m) q = [1., 2., 3., 4.] * self.ureg.m q.put([0, 2], [1., 2.]*self.ureg.mm) self.assertQuantityEqual(q, [0.001, 2., 0.002, 4.]*self.ureg.m) q = [1., 2., 3., 4.] * self.ureg.m / self.ureg.mm q.put([0, 2], [1., 2.]) self.assertQuantityEqual(q, [0.001, 2., 0.002, 4.]*self.ureg.m/self.ureg.mm) q = [1., 2., 3., 4.] * self.ureg.m self.assertRaises(ValueError, q.put, [0, 2], [4., 6.] * self.ureg.J) self.assertRaises(ValueError, q.put, [0, 2], [4., 6.]) def test_repeat(self): self.assertQuantityEqual(self.q.repeat(2), [1,1,2,2,3,3,4,4]*self.ureg.m) def test_sort(self): q = [4, 5, 2, 3, 1, 6] * self.ureg.m q.sort() self.assertQuantityEqual(q, [1, 2, 3, 4, 5, 6] * self.ureg.m) def test_argsort(self): q = [1, 4, 5, 6, 2, 9] * self.ureg.MeV np.testing.assert_array_equal(q.argsort(), [0, 4, 1, 2, 3, 5]) def test_diagonal(self): q = [[1, 2, 3], [1, 2, 3], [1, 2, 3]] * self.ureg.m self.assertQuantityEqual(q.diagonal(offset=1), [2, 3] * self.ureg.m) def test_compress(self): self.assertQuantityEqual(self.q.compress([False, True], axis=0), [[3, 4]] * self.ureg.m) self.assertQuantityEqual(self.q.compress([False, True], axis=1), [[2], [4]] * self.ureg.m) def test_searchsorted(self): q = self.q.flatten() np.testing.assert_array_equal(q.searchsorted([1.5, 2.5] * self.ureg.m), [1, 2]) q = self.q.flatten() self.assertRaises(ValueError, q.searchsorted, [1.5, 2.5]) def test_nonzero(self): q = [1, 0, 5, 6, 0, 9] * self.ureg.m np.testing.assert_array_equal(q.nonzero()[0], [0, 2, 3, 5]) def test_max(self): self.assertEqual(self.q.max(), 4*self.ureg.m) def test_argmax(self): self.assertEqual(self.q.argmax(), 3) def test_min(self): self.assertEqual(self.q.min(), 1 * self.ureg.m) def test_argmin(self): self.assertEqual(self.q.argmin(), 0) def test_ptp(self): self.assertEqual(self.q.ptp(), 3 * self.ureg.m) def test_clip(self): self.assertQuantityEqual( self.q.clip(max=2*self.ureg.m), [[1, 2], [2, 2]] * self.ureg.m ) self.assertQuantityEqual( self.q.clip(min=3*self.ureg.m), [[3, 3], [3, 4]] * self.ureg.m ) self.assertQuantityEqual( self.q.clip(min=2*self.ureg.m, max=3*self.ureg.m), [[2, 2], [3, 3]] * self.ureg.m ) self.assertRaises(ValueError, self.q.clip, self.ureg.J) self.assertRaises(ValueError, self.q.clip, 1) def test_round(self): q = [1, 1.33, 5.67, 22] * self.ureg.m self.assertQuantityEqual(q.round(0), [1, 1, 6, 22] * self.ureg.m) self.assertQuantityEqual(q.round(-1), [0, 0, 10, 20] * self.ureg.m) self.assertQuantityEqual(q.round(1), [1, 1.3, 5.7, 22] * self.ureg.m) def test_trace(self): self.assertEqual(self.q.trace(), (1+4) * self.ureg.m) def test_cumsum(self): self.assertQuantityEqual(self.q.cumsum(), [1, 3, 6, 10] * self.ureg.m) def test_mean(self): self.assertEqual(self.q.mean(), 2.5 * self.ureg.m) def test_var(self): self.assertEqual(self.q.var(), 1.25*self.ureg.m**2) def test_std(self): self.assertQuantityAlmostEqual(self.q.std(), 1.11803*self.ureg.m, rtol=1e-5) def test_prod(self): self.assertEqual(self.q.prod(), 24 * self.ureg.m**4) def test_cumprod(self): self.assertRaises(ValueError, self.q.cumprod) self.assertQuantityEqual((self.q / self.ureg.m).cumprod(), [1, 2, 6, 24]) def test_integer_div(self): a = [1] * self.ureg.m b = [2] * self.ureg.m c = a/b # Should be float division self.assertEqual(c.magnitude[0], 0.5) a /= b # Should be integer division self.assertEqual(a.magnitude[0], 0) def test_conj(self): self.assertQuantityEqual((self.q*(1+1j)).conj(), self.q*(1-1j)) self.assertQuantityEqual((self.q*(1+1j)).conjugate(), self.q*(1-1j)) def test_getitem(self): self.assertRaises(IndexError, self.q.__getitem__, (0,10)) self.assertQuantityEqual(self.q[0], [1,2]*self.ureg.m) self.assertEqual(self.q[1,1], 4*self.ureg.m) def test_setitem(self): self.assertRaises(ValueError, self.q.__setitem__, (0,0), 1) self.assertRaises(ValueError, self.q.__setitem__, (0,0), 1*self.ureg.J) self.assertRaises(ValueError, self.q.__setitem__, 0, 1) self.assertRaises(ValueError, self.q.__setitem__, 0, np.ndarray([1, 2])) self.assertRaises(ValueError, self.q.__setitem__, 0, 1*self.ureg.J) q = self.q.copy() q[0] = 1*self.ureg.m self.assertQuantityEqual(q, [[1,1],[3,4]]*self.ureg.m) q = self.q.copy() q.__setitem__(Ellipsis, 1*self.ureg.m) self.assertQuantityEqual(q, [[1,1],[1,1]]*self.ureg.m) q = self.q.copy() q[:] = 1*self.ureg.m self.assertQuantityEqual(q, [[1,1],[1,1]]*self.ureg.m) # check and see that dimensionless num bers work correctly q = [0,1,2,3]*self.ureg.dimensionless q[0] = 1 self.assertQuantityEqual(q, np.asarray([1,1,2,3])) q[0] = self.ureg.m/self.ureg.mm self.assertQuantityEqual(q, np.asarray([1000, 1,2,3])) q = [0.,1.,2.,3.] * self.ureg.m / self.ureg.mm q[0] = 1. self.assertQuantityEqual(q, [0.001,1,2,3]*self.ureg.m / self.ureg.mm) def test_iterator(self): for q, v in zip(self.q.flatten(), [1, 2, 3, 4]): self.assertEqual(q, v * self.ureg.m) def test_reversible_op(self): """ """ x = self.q.magnitude u = self.Q_(np.ones(x.shape)) self.assertQuantityEqual(x / self.q, u * x / self.q) self.assertQuantityEqual(x * self.q, u * x * self.q) self.assertQuantityEqual(x + u, u + x) self.assertQuantityEqual(x - u, -(u - x)) def test_pickle(self): import pickle def pickle_test(q): pq = pickle.loads(pickle.dumps(q)) np.testing.assert_array_equal(q.magnitude, pq.magnitude) self.assertEqual(q.units, pq.units) pickle_test([10,20]*self.ureg.m) def test_equal(self): x = self.q.magnitude u = self.Q_(np.ones(x.shape)) self.assertQuantityEqual(u, u) self.assertQuantityEqual(u == u, u.magnitude == u.magnitude) self.assertQuantityEqual(u == 1, u.magnitude == 1) @helpers.requires_numpy() class TestNumpyNeedsSubclassing(TestUFuncs): FORCE_NDARRAY = True @property def q(self): return [1. ,2., 3., 4.] * self.ureg.J @unittest.expectedFailure def test_unwrap(self): """unwrap depends on diff """ self.assertQuantityEqual(np.unwrap([0,3*np.pi]*self.ureg.radians), [0,np.pi]) self.assertQuantityEqual(np.unwrap([0,540]*self.ureg.deg), [0,180]*self.ureg.deg) @unittest.expectedFailure def test_trapz(self): """Units are erased by asanyarray, Quantity does not inherit from NDArray """ self.assertQuantityEqual(np.trapz(self.q, dx=1*self.ureg.m), 7.5 * self.ureg.J*self.ureg.m) @unittest.expectedFailure def test_diff(self): """Units are erased by asanyarray, Quantity does not inherit from NDArray """ self.assertQuantityEqual(np.diff(self.q, 1), [1, 1, 1] * self.ureg.J) @unittest.expectedFailure def test_ediff1d(self): """Units are erased by asanyarray, Quantity does not inherit from NDArray """ self.assertQuantityEqual(np.ediff1d(self.q, 1 * self.ureg.J), [1, 1, 1] * self.ureg.J) @unittest.expectedFailure def test_fix(self): """Units are erased by asanyarray, Quantity does not inherit from NDArray """ self.assertQuantityEqual(np.fix(3.14 * self.ureg.m), 3.0 * self.ureg.m) self.assertQuantityEqual(np.fix(3.0 * self.ureg.m), 3.0 * self.ureg.m) self.assertQuantityEqual( np.fix([2.1, 2.9, -2.1, -2.9] * self.ureg.m), [2., 2., -2., -2.] * self.ureg.m ) @unittest.expectedFailure def test_gradient(self): """shape is a property not a function """ l = np.gradient([[1,1],[3,4]] * self.ureg.J, 1 * self.ureg.m) self.assertQuantityEqual(l[0], [[2., 3.], [2., 3.]] * self.ureg.J / self.ureg.m) self.assertQuantityEqual(l[1], [[0., 0.], [1., 1.]] * self.ureg.J / self.ureg.m) @unittest.expectedFailure def test_cross(self): """Units are erased by asarray, Quantity does not inherit from NDArray """ a = [[3,-3, 1]] * self.ureg.kPa b = [[4, 9, 2]] * self.ureg.m**2 self.assertQuantityEqual(np.cross(a, b), [-15, -2, 39] * self.ureg.kPa * self.ureg.m**2) @unittest.expectedFailure def test_power(self): """This is not supported as different elements might end up with different units eg. ([1, 1] * m) ** [2, 3] Must force exponent to single value """ self._test2(np.power, self.q1, (self.qless, np.asarray([1., 2, 3, 4])), (self.q2, ),) @unittest.expectedFailure def test_ones_like(self): """Units are erased by emptyarra, Quantity does not inherit from NDArray """ self._test1(np.ones_like, (self.q2, self.qs, self.qless, self.qi), (), 2) @unittest.skip class TestBitTwiddlingUfuncs(TestUFuncs): """Universal functions (ufuncs) > Bittwiddling functions http://docs.scipy.org/doc/numpy/reference/ufuncs.html#bittwiddlingfunctions bitwise_and(x1, x2[, out]) Compute the bitwise AND of two arrays elementwise. bitwise_or(x1, x2[, out]) Compute the bitwise OR of two arrays elementwise. bitwise_xor(x1, x2[, out]) Compute the bitwise XOR of two arrays elementwise. invert(x[, out]) Compute bitwise inversion, or bitwise NOT, elementwise. left_shift(x1, x2[, out]) Shift the bits of an integer to the left. right_shift(x1, x2[, out]) Shift the bits of an integer to the right. """ @property def qless(self): return np.asarray([1, 2, 3, 4], dtype=np.uint8) * self.ureg.dimensionless @property def qs(self): return 8 * self.ureg.J @property def q1(self): return np.asarray([1, 2, 3, 4], dtype=np.uint8) * self.ureg.J @property def q2(self): return 2 * self.q1 @property def qm(self): return np.asarray([1, 2, 3, 4], dtype=np.uint8) * self.ureg.m def test_bitwise_and(self): self._test2(np.bitwise_and, self.q1, (self.q2, self.qs,), (self.qm, ), 'same') def test_bitwise_or(self): self._test2(np.bitwise_or, self.q1, (self.q1, self.q2, self.qs, ), (self.qm,), 'same') def test_bitwise_xor(self): self._test2(np.bitwise_xor, self.q1, (self.q1, self.q2, self.qs, ), (self.qm, ), 'same') def test_invert(self): self._test1(np.invert, (self.q1, self.q2, self.qs, ), (), 'same') def test_left_shift(self): self._test2(np.left_shift, self.q1, (self.qless, 2), (self.q1, self.q2, self.qs, ), 'same') def test_right_shift(self): self._test2(np.right_shift, self.q1, (self.qless, 2), (self.q1, self.q2, self.qs, ), 'same') class TestNDArrayQunatityMath(QuantityTestCase): @helpers.requires_numpy() def test_exponentiation_array_exp(self): arr = np.array(range(3), dtype=np.float) q = self.Q_(arr, None) for op_ in [op.pow, op.ipow]: q_cp = copy.copy(q) self.assertRaises(DimensionalityError, op_, 2., q_cp) arr_cp = copy.copy(arr) arr_cp = copy.copy(arr) q_cp = copy.copy(q) self.assertRaises(DimensionalityError, op_, q_cp, arr_cp) q_cp = copy.copy(q) q2_cp = copy.copy(q) self.assertRaises(DimensionalityError, op_, q_cp, q2_cp) @unittest.expectedFailure @helpers.requires_numpy() def test_exponentiation_array_exp_2(self): arr = np.array(range(3), dtype=np.float) #q = self.Q_(copy.copy(arr), None) q = self.Q_(copy.copy(arr), 'meter') arr_cp = copy.copy(arr) q_cp = copy.copy(q) # this fails as expected since numpy 1.8.0 but... self.assertRaises(DimensionalityError, op.pow, arr_cp, q_cp) # ..not for op.ipow ! # q_cp is treated as if it is an array. The units are ignored. # _Quantity.__ipow__ is never called arr_cp = copy.copy(arr) q_cp = copy.copy(q) self.assertRaises(DimensionalityError, op.ipow, arr_cp, q_cp)